Jatropha Genome Database

JcCB0020561.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0020561.10 + phase: 0 
         (477 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268526119|gb|FM891375.1|FM891375 FM891375 Jatropha curcas emb...   291   4e-79

>gi|268526119|gb|FM891375.1|FM891375 FM891375 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001648,
           mRNA sequence
          Length = 147

 Score =  291 bits (147), Expect = 4e-79
 Identities = 147/147 (100%)
 Strand = Plus / Plus

                                                                       
Query: 88  gaaaagccttacagaggtataaggatgaggaagtggggaaagtgggtcgctgaaattaga 147
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gaaaagccttacagaggtataaggatgaggaagtggggaaagtgggtcgctgaaattaga 60

                                                                       
Query: 148 gaacccaacaaacgttctagaatttggcttggctcttattctacccctatcgccgccgcg 207
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaacccaacaaacgttctagaatttggcttggctcttattctacccctatcgccgccgcg 120

                                      
Query: 208 cgtgcatatgacaccgccgttttctac 234
           |||||||||||||||||||||||||||
Sbjct: 121 cgtgcatatgacaccgccgttttctac 147