Jatropha Genome Database

JcCB0019791.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0019791.10 + phase: 0 
         (1296 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518912|gb|FM887379.1|FM887379 FM887379 Jatropha curcas emb...   367   e-101

>gi|268518912|gb|FM887379.1|FM887379 FM887379 Jatropha curcas embryo
            35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000567,
            mRNA sequence
          Length = 306

 Score =  367 bits (185), Expect = e-101
 Identities = 188/189 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1108 cttgagaaggctcaagttttaagagaacaagcaacaaagaaaataagttctactataatg 1167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    cttgagaaggctcaagttttaagagaacaagcaacaaagaaaataagttctactataatg 60

                                                                        
Query: 1168 caaattacttgtcaagcttgcaagcaacattttcaagctccggctgccgcggtggctgcg 1227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   caaattacttgtcaagcttgcaagcaacattttcaagctccggctgccgcggtggctgcg 120

                                                                        
Query: 1228 caggcagatgagacgtctcttgctatgagttatatgtcctcagcaacaactgaaggagaa 1287
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121  caggcagatgagacgtctcttgctatgagtaatatgtcctcagcaacaactgaaggagaa 180

                     
Query: 1288 ggagagtga 1296
            |||||||||
Sbjct: 181  ggagagtga 189