Jatropha Genome Database

JcCB0017941.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0017941.30 + phase: 0 
         (1167 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268523622|gb|FM892155.1|FM892155 FM892155 Jatropha curcas emb...   747   0.0  

>gi|268523622|gb|FM892155.1|FM892155 FM892155 Jatropha curcas embryo
            56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_002650,
            mRNA sequence
          Length = 531

 Score =  747 bits (377), Expect = 0.0
 Identities = 394/402 (98%)
 Strand = Plus / Plus

                                                                        
Query: 765  tacaaaagaactcttttgctcctctgctttgagaaactgcaatgagaatcccatcttgat 824
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8    tacaaaagaactcttttgctcctctgctttgagaaactgcaatgagaatcccatcttgat 67

                                                                        
Query: 825  cttgacacacggcgacttattaacaagtgaggagagaattgaaggcaggctaaagatatg 884
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68   cttgacacacggcgacttattaacaagtgaggagagaattgaaggcaggctaaagatatg 127

                                                                        
Query: 885  tgaaagtttaggcatatcagagacaaatgggatatacgatgtcgtttgccttacagaata 944
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128  tgaaagtttaggcatatcagagacaaatgggatatacgatgtcgtttgccttacagaata 187

                                                                        
Query: 945  tggatttttagcagaagaatctgaccctgttagtgcttacaatgtagctgaagcagtata 1004
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188  tggatttttagcagaagaatctgaccctgttagtgcttacaatgtagctgaagcagtata 247

                                                                        
Query: 1005 tagggcattgctcatttctgacagggaacacttgccaaagaaaactttgcaagactggac 1064
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 248  tagggcattgctcatttctgacagggaacacttgccaaagaaaacgttgcaagactggac 307

                                                                        
Query: 1065 gctcttcatattatcatggctaatgtctctcatggctannnnnnncgcttttcttgctca 1124
            ||||||||||||||||||||||||||||||||||||||       |||||||||||||||
Sbjct: 308  gctcttcatattatcatggctaatgtctctcatggctatttttttcgcttttcttgctca 367

                                                      
Query: 1125 aatttgctctgcacttggacatagcaacaagctgaagcgtta 1166
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368  aatttgctctgcacttggacatagcaacaagctgaagcgtta 409