Jatropha Genome Database

JcCB0012961.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0012961.20 - phase: 0 /partial
         (231 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525679|gb|FM890934.1|FM890934 FM890934 Jatropha curcas emb...   456   e-129

>gi|268525679|gb|FM890934.1|FM890934 FM890934 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000896,
           mRNA sequence
          Length = 643

 Score =  456 bits (230), Expect = e-129
 Identities = 230/230 (100%)
 Strand = Plus / Minus

                                                                       
Query: 2   cagcacttgagaaactgttgaaagatcatgctggaaaatatgcgactggagacgaagttt 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 cagcacttgagaaactgttgaaagatcatgctggaaaatatgcgactggagacgaagttt 409

                                                                       
Query: 62  tcctggcagatttgtttctagcaccacagattcatgcagcagaaaggttcaaagttgaca 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tcctggcagatttgtttctagcaccacagattcatgcagcagaaaggttcaaagttgaca 349

                                                                       
Query: 122 tgactcagttccctcttctattgaggttgtatgaggcatacaatgagctaccagcattcc 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tgactcagttccctcttctattgaggttgtatgaggcatacaatgagctaccagcattcc 289

                                                             
Query: 182 agaaagctatgccacaaaaacaaccagatgctcctccatctatcaccagc 231
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 agaaagctatgccacaaaaacaaccagatgctcctccatctatcaccagc 239