Jatropha Genome Database

JcCB0011781.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0011781.10 - phase: 0 
         (786 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525751|gb|FM891006.1|FM891006 FM891006 Jatropha curcas emb...   341   7e-94
gi|268522532|gb|FM896536.1|FM896536 FM896536 Jatropha curcas emb...    80   4e-15

>gi|268525751|gb|FM891006.1|FM891006 FM891006 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000984,
           mRNA sequence
          Length = 524

 Score =  341 bits (172), Expect = 7e-94
 Identities = 178/180 (98%)
 Strand = Plus / Minus

                                                                       
Query: 607 tatgacctttctccaattaaggtgactttcacagagcagcatgtatcattcttgcacttc 666
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tatgacctttctccaataaaggtgactttcacagagcagcatgtatcattcttgcacttc 465

                                                                       
Query: 667 ctaacaaatgtgtgcgctattgttggaggtgttttcactgtttcgggaatactggattca 726
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ctaacaaatgtgtgcgctattgttggaggtgttttcactgtttcgggaatactggattca 405

                                                                       
Query: 727 tttatatatcacggtcaaaaggcaatcaagaagaagatggaaattggtaaatttagttga 786
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gttatatatcacggtcaaaaggcaatcaagaagaagatggaaattggtaaatttagttga 345


>gi|268522532|gb|FM896536.1|FM896536 FM896536 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003769,
           mRNA sequence
          Length = 595

 Score = 79.8 bits (40), Expect = 4e-15
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                   
Query: 7   attgacaagcctttgcagagacatggtggcaggcttgagc 46
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 attgacaagcctttgcagagacatggtggcaggcttgagc 595