Jatropha Genome Database
- JcCB0011561.40
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0011561.40 + phase: 0
(399 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|237680293|gb|GO246477.1|GO246477 JcrME_RL0021 Expressed seque... 791 0.0
gi|237680470|gb|GO246621.1|GO246621 JcrME_RL0165 Expressed seque... 523 e-149
>gi|237680293|gb|GO246477.1|GO246477 JcrME_RL0021 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 620
Score = 791 bits (399), Expect = 0.0
Identities = 399/399 (100%)
Strand = Plus / Minus
Query: 1 atggcgtttacgttgagaagcttgaaggtgccgcccaactcggcgagtctggaggaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atggcgtttacgttgagaagcttgaaggtgccgcccaactcggcgagtctggaggaggca 498
Query: 61 agggctcgagtgtttgatttctttagaacggcttgcagatccattcctaccataatggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 agggctcgagtgtttgatttctttagaacggcttgcagatccattcctaccataatggac 438
Query: 121 atctacaacttacaggacgtcgttaccgtttccgagctccgttccagcatcgcctctcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atctacaacttacaggacgtcgttaccgtttccgagctccgttccagcatcgcctctcag 378
Query: 181 atccgcaagaactccaacgtcaccaatcccaaggtgattgatatgctgctattcaaagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atccgcaagaactccaacgtcaccaatcccaaggtgattgatatgctgctattcaaagga 318
Query: 241 atggaagagctgaacaacattgtagaacatgcaaagcagcgtcatcatattattggccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atggaagagctgaacaacattgtagaacatgcaaagcagcgtcatcatattattggccaa 258
Query: 301 tatgtagtgggtcagcatgggcttgtgcaggatttggacagtaaagatcaaggcatgtcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tatgtagtgggtcagcatgggcttgtgcaggatttggacagtaaagatcaaggcatgtcc 198
Query: 361 gacttcctcaagaacttctacaagagcaactactactaa 399
|||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gacttcctcaagaacttctacaagagcaactactactaa 159
>gi|237680470|gb|GO246621.1|GO246621 JcrME_RL0165 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 489
Score = 523 bits (264), Expect = e-149
Identities = 315/332 (94%)
Strand = Plus / Minus
Query: 68 gagtgtttgatttctttagaacggcttgcagatccattcctaccataatggacatctaca 127
|||||||||||||||||||||||||| |||||||||||||| ||||| | | |||||
Sbjct: 489 gagtgtttgatttctttagaacggctagcagatccattcctgccatagggagcggctaca 430
Query: 128 acttacaggacgtcgttaccgtttccgagctccgttccagcatcgcctctcagatccgca 187
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 429 acttacaggacgtcgttaccgtttccgagctccgttccagcatggcctttcagatccgca 370
Query: 188 agaactccaacgtcaccaatcccaaggtgattgatatgctgctattcaaaggaatggaag 247
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ataactccatcgtcaccaatcccaaggtgattgatatgctgctattcaaaggaatggaag 310
Query: 248 agctgaacaacattgtagaacatgcaaagcagcgtcatcatattattggccaatatgtag 307
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 309 agctgaacaacattgtagaacatgcaaagcagcgtcttcatattattgtccaatatgtag 250
Query: 308 tgggtcagcatgggcttgtgcaggatttggacagtaaagatcaaggcatgtccgacttcc 367
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 249 tgggtcagcatgggcttgtccaggatttggacagtaaagatcaaagcatgtccgacttcc 190
Query: 368 tcaagaacttctacaagagcaactactactaa 399
|||||||||||| |||||||||||||||||||
Sbjct: 189 tcaagaacttctccaagagcaactactactaa 158