Jatropha Genome Database

JcCB0009671.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0009671.20 - phase: 0 
         (1101 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262091051|gb|GT228478.1|GT228478 JC043 Jatropha seeds from fr...   359   4e-99

>gi|262091051|gb|GT228478.1|GT228478 JC043 Jatropha seeds from fruits
            at three stages of maturation Jatropha curcas cDNA clone
            Contig43 5', mRNA sequence
          Length = 418

 Score =  359 bits (181), Expect = 4e-99
 Identities = 199/205 (97%)
 Strand = Plus / Minus

                                                                        
Query: 897  ggccattagtgccggagcatttgggtgtacaattagtggagcagggcctacagctgtggc 956
            ||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394  ggccattacggccggggcatttgggtgtacaattagtggagcagggcctacagctgtggc 335

                                                                        
Query: 957  ggtgattgatgatgaggaaagaggaaaggagattggagagaagatggtggaggcctttct 1016
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334  ggtgattgatgatgaggaaagaggaaaggagattggagagaagatggtggaggcctttct 275

                                                                        
Query: 1017 gaaagaaggaaatttgaaggctgtggctatggtgaagaggctagatagagttggtgctag 1076
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 274  gaaagaaggaaatttgaaggctgtggctatggtgaagaggctagttagagttggtgctag 215

                                     
Query: 1077 gcttgttggcagtgttccaacctga 1101
            |||| ||| ||||||||||||||||
Sbjct: 214  gctttttgtcagtgttccaacctga 190