Jatropha Genome Database

JcCB0009521.40
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0009521.40 - phase: 0 /partial
         (693 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518239|gb|FM888513.1|FM888513 FM888513 Jatropha curcas emb...   121   1e-27

>gi|268518239|gb|FM888513.1|FM888513 FM888513 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001940,
           mRNA sequence
          Length = 591

 Score =  121 bits (61), Expect = 1e-27
 Identities = 103/117 (88%)
 Strand = Plus / Minus

                                                                       
Query: 104 catgggctttctctgataaagatcatggctggcaagtttctgattgcactgcagaaagtt 163
           ||||| ||||||||||  ||||||| || ||||||||||||||||||||||| ||| |  
Sbjct: 430 catggactttctctgaccaagatcacggatggcaagtttctgattgcactgccgaaggac 371

                                                                    
Query: 164 taaagtgttgccttcttttctcaatgatgcctcctgaaattgttggtgagaaaatgg 220
           | ||||||||||||||||||||||||||||| || || ||||||||||| |||||||
Sbjct: 370 ttaagtgttgccttcttttctcaatgatgccgccagagattgttggtgacaaaatgg 314