Jatropha Genome Database

JcCB0005461.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0005461.30 - phase: 0 /partial
         (228 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237679949|gb|GO247254.1|GO247254 JcrME_RL0798 Expressed seque...   186   7e-48

>gi|237679949|gb|GO247254.1|GO247254 JcrME_RL0798 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 730

 Score =  186 bits (94), Expect = 7e-48
 Identities = 121/130 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttctctctggatcctacatgagttgccgtcaatgcttcaataatggttctggggatccc 60
           |||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||
Sbjct: 354 tttctctctggatcctacatgagttgccatcaatgcttcaaatatggttctggggatccc 413

                                                                       
Query: 61  tataatatttgttatgattgttatagcagaaacaacattgatcatcataaggatgctacc 120
           ||||| |||||||||||||||||||||||||||||  |||||||||||| |||||||  |
Sbjct: 414 tataacatttgttatgattgttatagcagaaacaaatttgatcatcatagggatgcttac 473

                     
Query: 121 tttgtcgata 130
           ||||||||||
Sbjct: 474 tttgtcgata 483