Jatropha Genome Database

JcCB0003651.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0003651.20 + phase: 0 /pseudo
         (999 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237680854|gb|GO247005.1|GO247005 JcrME_RL0549 Expressed seque...    50   5e-06

>gi|237680854|gb|GO247005.1|GO247005 JcrME_RL0549 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 560

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 644 cttggagaaaatatggacagaaacccataaagggatctccttatcccag 692
           |||||||||| || || ||||||||||| ||||| || |||||||||||
Sbjct: 490 cttggagaaagtacggccagaaacccatcaagggttccccttatcccag 538