Jatropha Genome Database

JcCB0003261.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0003261.20 - phase: 0 
         (1326 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268520137|gb|FM889985.1|FM889985 FM889985 Jatropha curcas emb...   559   e-159

>gi|268520137|gb|FM889985.1|FM889985 FM889985 Jatropha curcas embryo
            35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003752,
            mRNA sequence
          Length = 542

 Score =  559 bits (282), Expect = e-159
 Identities = 294/298 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1029 agaagctgttgcagccggcatggtgatggctgttgacatgtcataccgccttggttggat 1088
            |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 542  agaagctgttgcagccggcatgttgatggctgttgacatgtcataccgccgtggttggat 483

                                                                        
Query: 1089 tgatgattcaattgtaaagcgagttcataacattcttcaacaggctaagttacccaccgc 1148
            |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 482  tgatgattcaattgtaaagcgagttcattacattcttctacaggctaagttacccaccgc 423

                                                                        
Query: 1149 gccaccagacaccatgactgtagaaatgtttaaatccgtcatggcggttgataagaaggt 1208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422  gccaccagacaccatgactgtagaaatgtttaaatccgtcatggcggttgataagaaggt 363

                                                                        
Query: 1209 agctgatgggctgctaagacttatcctgcttaagggtcctctgggtaattgtgtatttac 1268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362  agctgatgggctgctaagacttatcctgcttaagggtcctctgggtaattgtgtatttac 303

                                                                      
Query: 1269 gggtgattatgataggaaggctctcgatgatacactccgggcattttgcaagtcatga 1326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  gggtgattatgataggaaggctctcgatgatacactccgggcattttgcaagtcatga 245