Jatropha Genome Database

JcCB0001131.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0001131.10 - phase: 0 /pseudo
         (346 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262091321|gb|GT228748.1|GT228748 JC313 Jatropha seeds from fr...    94   1e-19

>gi|262091321|gb|GT228748.1|GT228748 JC313 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL06SE.E07.scf 5', mRNA sequence
          Length = 603

 Score = 93.7 bits (47), Expect = 1e-19
 Identities = 125/151 (82%)
 Strand = Plus / Plus

                                                                       
Query: 26  agagaatagaaaacaagatcaaccgccaagttaccttctccaaaagaagaaatggtttgc 85
           |||| ||||| |||||||||||||| ||||| || ||||| |||||||||||||| ||| 
Sbjct: 371 agaggatagagaacaagatcaaccggcaagtcactttctcgaaaagaagaaatgggttgt 430

                                                                       
Query: 86  tcaaaaaagcctatgagctctcggttctttgtgatgctgaggtcgctctcatcatcttct 145
           | || ||||| || ||||| || ||||| || |||||||| || || || || |||||||
Sbjct: 431 tgaagaaagcttacgagctttctgttctctgcgatgctgaagttgcccttattatcttct 490

                                          
Query: 146 ctagccgcggcaaggtttctgagtttggtag 176
           |||| || |||||| ||| ||| ||||||||
Sbjct: 491 ctagtcgtggcaagctttatgaatttggtag 521