Jatropha Genome Database

JcCA0317741.40
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0317741.40 - phase: 0 /partial
         (195 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268519242|gb|FM887709.1|FM887709 FM887709 Jatropha curcas emb...   100   1e-21

>gi|268519242|gb|FM887709.1|FM887709 FM887709 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000960,
           mRNA sequence
          Length = 388

 Score = 99.6 bits (50), Expect = 1e-21
 Identities = 113/134 (84%)
 Strand = Plus / Plus

                                                                       
Query: 7   gttcaatcagatcctgctggacgcttggttataacaggtcaaccagagcagcttgacaat 66
           |||||||| ||||| || ||||||||| ||||| | |||||||||||||| || || |||
Sbjct: 253 gttcaatctgatccagcaggacgcttgattatatcgggtcaaccagagcaactggataat 312

                                                                       
Query: 67  ccttggggcataacgccctttaagaaggttgtaagcttaccttcaagaattgacccgctt 126
           ||||||||  | || || ||||| |||||||| || ||||||||| ||||||| || | |
Sbjct: 313 ccttggggtgtcacaccatttaaaaaggttgtcagtttaccttcacgaattgatccacat 372

                         
Query: 127 cagacatctgctgt 140
           ||||||||||||||
Sbjct: 373 cagacatctgctgt 386