Jatropha Genome Database

JcCA0317211.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0317211.30 - phase: 0 
         (921 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522848|gb|FM896291.1|FM896291 FM896291 Jatropha curcas emb...    64   3e-10

>gi|268522848|gb|FM896291.1|FM896291 FM896291 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003483,
           mRNA sequence
          Length = 260

 Score = 63.9 bits (32), Expect = 3e-10
 Identities = 86/104 (82%)
 Strand = Plus / Plus

                                                                       
Query: 550 caagaggttccacatgaaggacccatgtgtgatctattgtggtctgatccagacgatcga 609
           ||||| ||||| ||||| || ||||||||||| || |||||||||||||| || ||||| 
Sbjct: 84  caagaagttccccatgagggtcccatgtgtgaccttttgtggtctgatcctgatgatcgt 143

                                                       
Query: 610 tgtgggtggggcatatctcctcgtggtgctggctatacatttgg 653
           ||||| ||||| || || ||  | |||||||| ||||| |||||
Sbjct: 144 tgtggttggggtatctcaccgaggggtgctggatatacctttgg 187