Jatropha Genome Database
- JcCA0317161.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317161.10 + phase: 0
(1065 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268520266|gb|FM890114.1|FM890114 FM890114 Jatropha curcas emb... 123 4e-28
gi|268521128|gb|FM891847.1|FM891847 FM891847 Jatropha curcas emb... 82 1e-15
gi|268521420|gb|FM894172.1|FM894172 FM894172 Jatropha curcas emb... 82 1e-15
gi|262090943|gb|GT229301.1|GT229301 JC866 Jatropha seeds from fr... 62 1e-09
gi|268517366|gb|FM887308.1|FM887308 FM887308 Jatropha curcas emb... 56 8e-08
>gi|268520266|gb|FM890114.1|FM890114 FM890114 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003914,
mRNA sequence
Length = 359
Score = 123 bits (62), Expect = 4e-28
Identities = 69/70 (98%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 997 atcatgaaaggttcagag-gctattgggcttgctccaagggccatggagaaatgtaagaa 1055
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 atcatgaaaggttcagagtgctattgggcttgctccaagggccatggagaaatgtaagaa 66
Query: 1056 tcgtaattag 1065
||||||||||
Sbjct: 67 tcgtaattag 76
>gi|268521128|gb|FM891847.1|FM891847 FM891847 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_002241,
mRNA sequence
Length = 282
Score = 81.8 bits (41), Expect = 1e-15
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 883 gatcttctccatggctctgaatatgttctcacatatgaagataaggacggtgactggatg 942
||||| || |||||||| ||||||||||| |||||||| ||||| || ||||| ||||||
Sbjct: 17 gatctgcttcatggctcagaatatgttcttacatatgaggataaagatggtgattggatg 76
Query: 943 cttgtcggcgatgtgccctgggagatgtt 971
||||| || ||||| || |||||||||||
Sbjct: 77 cttgttggtgatgttccatgggagatgtt 105
>gi|268521420|gb|FM894172.1|FM894172 FM894172 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004362,
mRNA sequence
Length = 318
Score = 81.8 bits (41), Expect = 1e-15
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 883 gatcttctccatggctctgaatatgttctcacatatgaagataaggacggtgactggatg 942
||||| || |||||||| ||||||||||| |||||||| ||||| || ||||| ||||||
Sbjct: 234 gatctgcttcatggctcagaatatgttcttacatatgaggataaagatggtgattggatg 175
Query: 943 cttgtcggcgatgtgccctgggagatgtt 971
||||| || ||||| || |||||||||||
Sbjct: 174 cttgttggtgatgttccatgggagatgtt 146
>gi|262090943|gb|GT229301.1|GT229301 JC866 Jatropha seeds from
fruits at three stages of maturation Jatropha curcas
cDNA clone PL21SE.F09.scf 5', mRNA sequence
Length = 465
Score = 61.9 bits (31), Expect = 1e-09
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 883 gatcttctccatggctctgaatatgttctcacatatgaagataaggacggtgactggatg 942
|||||||| |||| || || ||||| || ||||| || |||||||| || || ||||||
Sbjct: 431 gatcttctgaatggatcagagtatgtgctaacatacgaggataaggatggcgattggatg 372
Query: 943 cttgtcggcgatgtgccctgggagatgttta 973
||||| || |||||||| |||||||||||||
Sbjct: 371 cttgttggggatgtgccatgggagatgttta 341
>gi|268517366|gb|FM887308.1|FM887308 FM887308 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000478,
mRNA sequence
Length = 438
Score = 56.0 bits (28), Expect = 8e-08
Identities = 76/91 (83%), Gaps = 2/91 (2%)
Strand = Plus / Minus
Query: 883 gatcttctccatggctctgaatatgttctcacatatgaagataaggacgg--tgactgga 940
||||| || |||||||| ||||||||||| |||||||| ||||| || || || ||||
Sbjct: 352 gatctgcttcatggctcagaatatgttcttacatatgaggataaagatgggtcgattgga 293
Query: 941 tgcttgtcggcgatgtgccctgggagatgtt 971
||||||| || ||||| || |||||||||||
Sbjct: 292 tgcttgttggtgatgttccatgggagatgtt 262