Jatropha Genome Database

JcCA0316111.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0316111.10 - phase: 0 /pseudo/partial
         (3087 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262090581|gb|GT228939.1|GT228939 JC504 Jatropha seeds from fr...   167   9e-41

>gi|262090581|gb|GT228939.1|GT228939 JC504 Jatropha seeds from fruits
            at three stages of maturation Jatropha curcas cDNA clone
            PL11SE.G11.scf 5', mRNA sequence
          Length = 485

 Score =  167 bits (84), Expect = 9e-41
 Identities = 84/84 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2878 gatcaggatgagaatgcagaagaaaatgctcacgaacgtcttgcagcagctgggcttgaa 2937
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45   gatcaggatgagaatgcagaagaaaatgctcacgaacgtcttgcagcagctgggcttgaa 104

                                    
Query: 2938 gattctgatgcagaggatgaggcg 2961
            ||||||||||||||||||||||||
Sbjct: 105  gattctgatgcagaggatgaggcg 128



 Score =  119 bits (60), Expect = 2e-26
 Identities = 60/60 (100%)
 Strand = Plus / Plus

                                                                        
Query: 3028 gaatgtgcctacatcaacaagtaggaggaggcgggcatggtcagaatccgatgatgatga 3087
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128  gaatgtgcctacatcaacaagtaggaggaggcgggcatggtcagaatccgatgatgatga 187