Jatropha Genome Database
- JcCA0315721.40
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0315721.40 + phase: 0 /partial
(177 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268519023|gb|FM887490.1|FM887490 FM887490 Jatropha curcas emb... 349 6e-97
gi|268523618|gb|FM892151.1|FM892151 FM892151 Jatropha curcas emb... 349 6e-97
gi|268524260|gb|FM894940.1|FM894940 FM894940 Jatropha curcas emb... 349 6e-97
gi|268519250|gb|FM887717.1|FM887717 FM887717 Jatropha curcas emb... 123 7e-29
>gi|268519023|gb|FM887490.1|FM887490 FM887490 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000705,
mRNA sequence
Length = 534
Score = 349 bits (176), Expect = 6e-97
Identities = 176/176 (100%)
Strand = Plus / Plus
Query: 2 gagttaaaatttcagttaatcctcaagtgttgaactttagccaagcaaaggagaagaaaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 gagttaaaatttcagttaatcctcaagtgttgaactttagccaagcaaaggagaagaaaa 97
Query: 62 cttttactgttactgtaactggaagttcattgccaattaatactaacgcgtttgctcgtt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 cttttactgttactgtaactggaagttcattgccaattaatactaacgcgtttgctcgtt 157
Query: 122 tagagtggagtgatgggaaacatgttgttggtagtccaatagcagttagctggact 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tagagtggagtgatgggaaacatgttgttggtagtccaatagcagttagctggact 213
>gi|268523618|gb|FM892151.1|FM892151 FM892151 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_002644,
mRNA sequence
Length = 600
Score = 349 bits (176), Expect = 6e-97
Identities = 176/176 (100%)
Strand = Plus / Minus
Query: 2 gagttaaaatttcagttaatcctcaagtgttgaactttagccaagcaaaggagaagaaaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagttaaaatttcagttaatcctcaagtgttgaactttagccaagcaaaggagaagaaaa 242
Query: 62 cttttactgttactgtaactggaagttcattgccaattaatactaacgcgtttgctcgtt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttttactgttactgtaactggaagttcattgccaattaatactaacgcgtttgctcgtt 182
Query: 122 tagagtggagtgatgggaaacatgttgttggtagtccaatagcagttagctggact 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagagtggagtgatgggaaacatgttgttggtagtccaatagcagttagctggact 126
>gi|268524260|gb|FM894940.1|FM894940 FM894940 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000851,
mRNA sequence
Length = 579
Score = 349 bits (176), Expect = 6e-97
Identities = 176/176 (100%)
Strand = Plus / Plus
Query: 2 gagttaaaatttcagttaatcctcaagtgttgaactttagccaagcaaaggagaagaaaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 gagttaaaatttcagttaatcctcaagtgttgaactttagccaagcaaaggagaagaaaa 146
Query: 62 cttttactgttactgtaactggaagttcattgccaattaatactaacgcgtttgctcgtt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 cttttactgttactgtaactggaagttcattgccaattaatactaacgcgtttgctcgtt 206
Query: 122 tagagtggagtgatgggaaacatgttgttggtagtccaatagcagttagctggact 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tagagtggagtgatgggaaacatgttgttggtagtccaatagcagttagctggact 262
>gi|268519250|gb|FM887717.1|FM887717 FM887717 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000968,
mRNA sequence
Length = 364
Score = 123 bits (62), Expect = 7e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 108 cgcgtttgctcgtttagagtggagtgatgggaaacatgttgttggtagtccaatagcagt 167
||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 cgcgtatgctcgtttagagtggagtgatgggaaacatgtagttggtagtccaatagcagt 60
Query: 168 tagctggact 177
||||||||||
Sbjct: 61 tagctggact 70