Jatropha Genome Database

JcCA0315581.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0315581.20 - phase: 0 
         (813 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525367|gb|FM896009.1|FM896009 FM896009 Jatropha curcas emb...   559   e-159

>gi|268525367|gb|FM896009.1|FM896009 FM896009 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003138,
           mRNA sequence
          Length = 471

 Score =  559 bits (282), Expect = e-159
 Identities = 282/282 (100%)
 Strand = Plus / Minus

                                                                       
Query: 532 catgtggtggatgcagttgccaattttatggctaaatgcattctatcaaatcctaaggct 591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 catgtggtggatgcagttgccaattttatggctaaatgcattctatcaaatcctaaggct 412

                                                                       
Query: 592 cagaaaatgactccagaggagctgcagaagtccctggaaaaagcattggaaggtgtgagc 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cagaaaatgactccagaggagctgcagaagtccctggaaaaagcattggaaggtgtgagc 352

                                                                       
Query: 652 aaatgggagaagatattaaatatttggcatgcaggacagctattttacactctggctacc 711
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 aaatgggagaagatattaaatatttggcatgcaggacagctattttacactctggctacc 292

                                                                       
Query: 712 tggggacttgccctgtgggggctgtatcggactcgatctattctgaaacttgctgcaaag 771
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tggggacttgccctgtgggggctgtatcggactcgatctattctgaaacttgctgcaaag 232

                                                     
Query: 772 ggcgttcacaaaaccagcaaagtcgttctaaaggcactttga 813
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ggcgttcacaaaaccagcaaagtcgttctaaaggcactttga 190