Jatropha Genome Database
- JcCA0314481.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0314481.20 - phase: 1 /partial
(1517 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268521644|gb|FM896852.1|FM896852 FM896852 Jatropha curcas emb... 632 0.0
>gi|268521644|gb|FM896852.1|FM896852 FM896852 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004259,
mRNA sequence
Length = 647
Score = 632 bits (319), Expect = 0.0
Identities = 361/374 (96%), Gaps = 5/374 (1%)
Strand = Plus / Plus
Query: 661 tcagttggagtcctgctggagtcataagagctgggcgcaatcctgccacatacagactta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tcagttggagtcctgctggagtcataagagctgggcgcaatcctgccacatacagactta 333
Query: 721 atggtgaaattgtacacattgatggtgatagcctttatg--attcagctttcaaacttcg 778
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 334 atggtgaaattgtacacattgatggtgatagcctttattgaattcagctttcaaacttcg 393
Query: 779 gattccacatctt--cctgcttttgcattggaatgcc-ttccaaatcgtgattctttagt 835
||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 394 gattccacatctttccctgcttttgcattggaatgcccttccaaatcgtgattctttagt 453
Query: 836 ttacgaaaaagtctatggaatagaagaagcatcaacgatctttcgtggaaccctccgcta 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ttacgaaaaagtctatggaatagaagaagcatcaacgatctttcgtggaaccctccgcta 513
Query: 896 tgaagggtttggcgaaatcatggggatacttgcaagaattggnnnnnnncgtaccgaacc 955
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 514 tgaagggtttggcgaaatcatggggatacttgcaagaattggtttatttcgtaccgaacc 573
Query: 956 tcatccagttcttagatgtgaacggagacccacattcaaaacattcctttgtgaactact 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tcatccagttcttagatgtgaacggagacccacattcaaaacattcctttgtgaactact 633
Query: 1016 aaagattcctggtg 1029
||||||||||||||
Sbjct: 634 aaagattcctggtg 647
Score = 418 bits (211), Expect = e-117
Identities = 214/215 (99%)
Strand = Plus / Plus
Query: 450 gatgattctatgtcagcactagacgaaaaggcaaaagctgctgatattacaattctcggt 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gatgattctatgtcagcactagacgaaaaggcaaaagctgctgatattacaattctcggt 64
Query: 510 gagatgggcatggaccctggcatagatcatatgatggcaatgaagatgattaatcaagct 569
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gagatgggcattgaccctggcatagatcatatgatggcaatgaagatgattaatcaagct 124
Query: 570 catgttcggaagggcagattaaagtcttttacatcttattgtggggcacttccatctcct 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 catgttcggaagggcagattaaagtcttttacatcttattgtggggcacttccatctcct 184
Query: 630 gcagctgcaaataacccactagcatataagttcag 664
|||||||||||||||||||||||||||||||||||
Sbjct: 185 gcagctgcaaataacccactagcatataagttcag 219