Jatropha Genome Database

JcCA0314441.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0314441.10 - phase: 0 /partial
         (439 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525679|gb|FM890934.1|FM890934 FM890934 Jatropha curcas emb...   323   9e-89

>gi|268525679|gb|FM890934.1|FM890934 FM890934 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000896,
           mRNA sequence
          Length = 643

 Score =  323 bits (163), Expect = 9e-89
 Identities = 163/163 (100%)
 Strand = Plus / Minus

                                                                       
Query: 277 cgtgatgttcagagaagagccatcaattaccaggctgcaaatattgtttcctcaagcata 336
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 cgtgatgttcagagaagagccatcaattaccaggctgcaaatattgtttcctcaagcata 569

                                                                       
Query: 337 cagccccttcagaatctagatgtgctgaaatttataggggaaaagatcagtccagatgag 396
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 cagccccttcagaatctagatgtgctgaaatttataggggaaaagatcagtccagatgag 509

                                                      
Query: 397 aaaattccttgggttcagtatcatgttcaaaaaggatttgcag 439
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aaaattccttgggttcagtatcatgttcaaaaaggatttgcag 466