Jatropha Genome Database

JcCA0313841.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0313841.20 + phase: 0 
         (1311 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524443|gb|FM895123.1|FM895123 FM895123 Jatropha curcas emb...   307   2e-83

>gi|268524443|gb|FM895123.1|FM895123 FM895123 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001695,
            mRNA sequence
          Length = 533

 Score =  307 bits (155), Expect = 2e-83
 Identities = 155/155 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1157 ctttgtttgagatagaacctgataatcctgccaactatgtcttattggctagaatttatg 1216
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5    ctttgtttgagatagaacctgataatcctgccaactatgtcttattggctagaatttatg 64

                                                                        
Query: 1217 ccagcatggggagacacggggaagctgagagaatgagaagagaaatgaaagagaagggag 1276
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65   ccagcatggggagacacggggaagctgagagaatgagaagagaaatgaaagagaagggag 124

                                               
Query: 1277 tgaaggtagctcctggcggtagctgggtgacataa 1311
            |||||||||||||||||||||||||||||||||||
Sbjct: 125  tgaaggtagctcctggcggtagctgggtgacataa 159