Jatropha Genome Database

JcCA0313601.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0313601.10 - phase: 1 /partial
         (374 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268523033|gb|FM896476.1|FM896476 FM896476 Jatropha curcas emb...   452   e-127

>gi|268523033|gb|FM896476.1|FM896476 FM896476 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003695,
           mRNA sequence
          Length = 446

 Score =  452 bits (228), Expect = e-127
 Identities = 228/228 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgatctcaaagtggtggggaataaattgaaggatattttagagatatctaacacatccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ctgatctcaaagtggtggggaataaattgaaggatattttagagatatctaacacatccc 278

                                                                       
Query: 61  tgaaaacaagaaaagttgttattgagctttgcaacattgttgcttcccgtggagcacaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tgaaaacaagaaaagttgttattgagctttgcaacattgttgcttcccgtggagcacaac 338

                                                                       
Query: 121 ttgcagcagctggaatcttgagtatcctgaagaaaatggggaaggatacggtcaaagagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ttgcagcagctggaatcttgagtatcctgaagaaaatggggaaggatacggtcaaagagg 398

                                                           
Query: 181 gggataaacagaagacggtgatagccttggatggtggattgtatgagc 228
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gggataaacagaagacggtgatagccttggatggtggattgtatgagc 446