Jatropha Genome Database

JcCA0313461.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0313461.10 + phase: 0 
         (621 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268516974|gb|FM892526.1|FM892526 FM892526 Jatropha curcas emb...    78   1e-14
gi|268523729|gb|FM892262.1|FM892262 FM892262 Jatropha curcas emb...    78   1e-14
gi|268525534|gb|FM890789.1|FM890789 FM890789 Jatropha curcas emb...    78   1e-14

>gi|268516974|gb|FM892526.1|FM892526 FM892526 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003095,
           mRNA sequence
          Length = 595

 Score = 77.8 bits (39), Expect = 1e-14
 Identities = 99/119 (83%)
 Strand = Plus / Plus

                                                                       
Query: 49  aaatgtgtgacagttggagatggagcagttggaaagacctgccttcttatctcctacact 108
           ||||| || |||||||| ||||| || ||||| ||||| ||| | || ||||||||||| 
Sbjct: 167 aaatgcgtcacagttggtgatggtgctgttggcaagacttgcatgctcatctcctacacc 226

                                                                      
Query: 109 agcaacaccttccccacagattatgttcctactgtttttgataacttcagtgccaatgt 167
           |||||||| || || || || ||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 227 agcaacacttttcctactgactatgtgcctactgtgtttgacaacttcagtgcgaatgt 285


>gi|268523729|gb|FM892262.1|FM892262 FM892262 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb1_002766,
           mRNA sequence
          Length = 569

 Score = 77.8 bits (39), Expect = 1e-14
 Identities = 99/119 (83%)
 Strand = Plus / Plus

                                                                       
Query: 49  aaatgtgtgacagttggagatggagcagttggaaagacctgccttcttatctcctacact 108
           ||||| || |||||||| ||||| || ||||| ||||| ||| | || ||||||||||| 
Sbjct: 189 aaatgcgtcacagttggtgatggtgctgttggcaagacttgcatgctcatctcctacacc 248

                                                                      
Query: 109 agcaacaccttccccacagattatgttcctactgtttttgataacttcagtgccaatgt 167
           |||||||| || || || || ||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 249 agcaacacttttcctactgactatgtgcctactgtgtttgacaacttcagtgcgaatgt 307


>gi|268525534|gb|FM890789.1|FM890789 FM890789 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000728,
           mRNA sequence
          Length = 546

 Score = 77.8 bits (39), Expect = 1e-14
 Identities = 99/119 (83%)
 Strand = Plus / Plus

                                                                       
Query: 49  aaatgtgtgacagttggagatggagcagttggaaagacctgccttcttatctcctacact 108
           ||||| || |||||||| ||||| || ||||| ||||| ||| | || ||||||||||| 
Sbjct: 196 aaatgcgtcacagttggtgatggtgctgttggcaagacttgcatgctcatctcctacacc 255

                                                                      
Query: 109 agcaacaccttccccacagattatgttcctactgtttttgataacttcagtgccaatgt 167
           |||||||| || || || || ||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 256 agcaacacttttcctactgactatgtgcctactgtgtttgacaacttcagtgcgaatgt 314