Jatropha Genome Database

JcCA0313071.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0313071.10 + phase: 0 
         (1098 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268519354|gb|FM887821.1|FM887821 FM887821 Jatropha curcas emb...    82   2e-15

>gi|268519354|gb|FM887821.1|FM887821 FM887821 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001093,
           mRNA sequence
          Length = 205

 Score = 81.8 bits (41), Expect = 2e-15
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 39  agatgagctcgatatcgtaatacccactattagaaatcttgatttcttggagatgtggag 98
           ||||||||| ||||| ||||| || ||||||||||| |||||||| ||||||||||||||
Sbjct: 102 agatgagcttgatattgtaatcccaactattagaaaccttgattttttggagatgtggag 161

                    
Query: 99  ggcattttt 107
           | |||||||
Sbjct: 162 gccattttt 170