Jatropha Genome Database

JcCA0313021.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0313021.20 - phase: 1 /pseudo/partial
         (386 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268517039|gb|FM892591.1|FM892591 FM892591 Jatropha curcas emb...    54   1e-07

>gi|268517039|gb|FM892591.1|FM892591 FM892591 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003186,
           mRNA sequence
          Length = 556

 Score = 54.0 bits (27), Expect = 1e-07
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 78  tactcaagtctctggaatgctgatgattaggctacaaga 116
           ||||| ||||| |||||||||||||||| ||||||||||
Sbjct: 280 tactccagtctgtggaatgctgatgattgggctacaaga 318