Jatropha Genome Database

JcCA0312771.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0312771.10 + phase: 0 /pseudo
         (2211 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268519810|gb|FM888277.1|FM888277 FM888277 Jatropha curcas emb...   287   3e-77

>gi|268519810|gb|FM888277.1|FM888277 FM888277 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001659,
           mRNA sequence
          Length = 489

 Score =  287 bits (145), Expect = 3e-77
 Identities = 153/156 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctattcgcgtcaccttcacctactctggctatgtcgcccaaaacatcgccgcctcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 atggctattcgcgtcaccttcacctactctggctatgtcgcccaaaacatcgccgcctcc 393

                                                                       
Query: 61  gccgggatccgggttggaaattgccgctctctccacgaatgttgggttcgctcacgcatc 120
           |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gccgggaatcgggttngaaattgccgctctctccacgaatgttgggttcgctcacgcatc 453

                                               
Query: 121 ttctcttcgcccactgttcagaataccgattacgaa 156
           ||||||||||||||||||||||||||||||||||||
Sbjct: 454 ttctcttcgcccactgttcagaataccgattacgaa 489