Jatropha Genome Database
- JcCA0312651.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0312651.30 - phase: 1 /partial
(473 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|218687326|gb|GH295980.1|GH295980 JCL429 Jatropha curcas total... 585 e-167
gi|218687539|gb|GH295586.1|GH295586 JCL35 Jatropha curcas total ... 585 e-167
gi|218686966|gb|GH295934.1|GH295934 JCL383 Jatropha curcas total... 583 e-167
gi|218687799|gb|GH296327.1|GH296327 JCL777 Jatropha curcas total... 583 e-167
gi|237680870|gb|GO247082.1|GO247082 JcrME_RL0626 Expressed seque... 502 e-142
>gi|218687326|gb|GH295980.1|GH295980 JCL429 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 527
Score = 585 bits (295), Expect = e-167
Identities = 295/295 (100%)
Strand = Plus / Plus
Query: 179 ggtaaatgttaaggatgttgctaatgcacatattcaagcttttgagattccgtcagcaag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtaaatgttaaggatgttgctaatgcacatattcaagcttttgagattccgtcagcaag 60
Query: 239 tggacgttactgtttggttgagacagttgcacactactcaaaggtggtggatactttgcg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggacgttactgtttggttgagacagttgcacactactcaaaggtggtggatactttgcg 120
Query: 299 tgagctttaccccgatttccaatttccagaaaagtgtgcggacgataagccttatgttcc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgagctttaccccgatttccaatttccagaaaagtgtgcggacgataagccttatgttcc 180
Query: 359 aacatatgaggtgtctaaggaaaaggctaaacgcctgggtattgacttcattcctctcaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacatatgaggtgtctaaggaaaaggctaaacgcctgggtattgacttcattcctctcaa 240
Query: 419 ggtgagcataaaggaaactgtggaaagcttaaaggagaaaggatttattgtgttt 473
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtgagcataaaggaaactgtggaaagcttaaaggagaaaggatttattgtgttt 295
>gi|218687539|gb|GH295586.1|GH295586 JCL35 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 527
Score = 585 bits (295), Expect = e-167
Identities = 295/295 (100%)
Strand = Plus / Plus
Query: 179 ggtaaatgttaaggatgttgctaatgcacatattcaagcttttgagattccgtcagcaag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtaaatgttaaggatgttgctaatgcacatattcaagcttttgagattccgtcagcaag 60
Query: 239 tggacgttactgtttggttgagacagttgcacactactcaaaggtggtggatactttgcg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggacgttactgtttggttgagacagttgcacactactcaaaggtggtggatactttgcg 120
Query: 299 tgagctttaccccgatttccaatttccagaaaagtgtgcggacgataagccttatgttcc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgagctttaccccgatttccaatttccagaaaagtgtgcggacgataagccttatgttcc 180
Query: 359 aacatatgaggtgtctaaggaaaaggctaaacgcctgggtattgacttcattcctctcaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacatatgaggtgtctaaggaaaaggctaaacgcctgggtattgacttcattcctctcaa 240
Query: 419 ggtgagcataaaggaaactgtggaaagcttaaaggagaaaggatttattgtgttt 473
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtgagcataaaggaaactgtggaaagcttaaaggagaaaggatttattgtgttt 295
>gi|218686966|gb|GH295934.1|GH295934 JCL383 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 503
Score = 583 bits (294), Expect = e-167
Identities = 294/294 (100%)
Strand = Plus / Plus
Query: 180 gtaaatgttaaggatgttgctaatgcacatattcaagcttttgagattccgtcagcaagt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtaaatgttaaggatgttgctaatgcacatattcaagcttttgagattccgtcagcaagt 60
Query: 240 ggacgttactgtttggttgagacagttgcacactactcaaaggtggtggatactttgcgt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggacgttactgtttggttgagacagttgcacactactcaaaggtggtggatactttgcgt 120
Query: 300 gagctttaccccgatttccaatttccagaaaagtgtgcggacgataagccttatgttcca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagctttaccccgatttccaatttccagaaaagtgtgcggacgataagccttatgttcca 180
Query: 360 acatatgaggtgtctaaggaaaaggctaaacgcctgggtattgacttcattcctctcaag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acatatgaggtgtctaaggaaaaggctaaacgcctgggtattgacttcattcctctcaag 240
Query: 420 gtgagcataaaggaaactgtggaaagcttaaaggagaaaggatttattgtgttt 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgagcataaaggaaactgtggaaagcttaaaggagaaaggatttattgtgttt 294
>gi|218687799|gb|GH296327.1|GH296327 JCL777 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 503
Score = 583 bits (294), Expect = e-167
Identities = 294/294 (100%)
Strand = Plus / Plus
Query: 180 gtaaatgttaaggatgttgctaatgcacatattcaagcttttgagattccgtcagcaagt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtaaatgttaaggatgttgctaatgcacatattcaagcttttgagattccgtcagcaagt 60
Query: 240 ggacgttactgtttggttgagacagttgcacactactcaaaggtggtggatactttgcgt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggacgttactgtttggttgagacagttgcacactactcaaaggtggtggatactttgcgt 120
Query: 300 gagctttaccccgatttccaatttccagaaaagtgtgcggacgataagccttatgttcca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagctttaccccgatttccaatttccagaaaagtgtgcggacgataagccttatgttcca 180
Query: 360 acatatgaggtgtctaaggaaaaggctaaacgcctgggtattgacttcattcctctcaag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acatatgaggtgtctaaggaaaaggctaaacgcctgggtattgacttcattcctctcaag 240
Query: 420 gtgagcataaaggaaactgtggaaagcttaaaggagaaaggatttattgtgttt 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgagcataaaggaaactgtggaaagcttaaaggagaaaggatttattgtgttt 294
>gi|237680870|gb|GO247082.1|GO247082 JcrME_RL0626 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 740
Score = 502 bits (253), Expect = e-142
Identities = 303/312 (97%), Gaps = 7/312 (2%)
Strand = Plus / Plus
Query: 1 tcaaagacct-ggctgaggatgccgctagaaa--ttgcaaa-gagaaagatatagacctg 56
|||||||||| |||||||||||||||| | || ||||||| ||||||||||||||||||
Sbjct: 382 tcaaagaccttggctgaggatgccgcttggaaatttgcaaaagagaaagatatagacctg 441
Query: 57 gttgctataaatccagcaatggtgattggtcctcttctacagccaacacttaatacaagt 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gttgctataaatccagcaatggtgattggtcctcttctacagccaacacttaatacaagt 501
Query: 117 gctgctgctgtattaagcttgatgaaaggagtacaaactttccccaatgcaacttttgga 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gctgctgctgtattaagcttgatgaaaggagtacaaactttccccaatgcaacttttgga 561
Query: 177 tgggtaaatgttaaggatgttgctaatgcacatattcaagcttttgagattccgtcagca 236
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 562 tgggtaaatgttaaggatgttgctaatgcacatattcaagcttttgagatt-cgtcagca 620
Query: 237 agtggacgttactgtttggttgagacagttgcacactactcaaaggtggtggatactttg 296
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 621 agtggacgttactgtttggttgagacag-tgcacactactc-aaggtggtggatactttg 678
Query: 297 cgtgagctttac 308
||||||||||||
Sbjct: 679 cgtgagctttac 690