Jatropha Genome Database

JcCA0312601.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0312601.30 + phase: 0 
         (168 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268517714|gb|FM893089.1|FM893089 FM893089 Jatropha curcas emb...   246   6e-66

>gi|268517714|gb|FM893089.1|FM893089 FM893089 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb1_003801,
           mRNA sequence
          Length = 473

 Score =  246 bits (124), Expect = 6e-66
 Identities = 124/124 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacccgaggaaagcagaagatcgaagcccaaaggaaaaatgcagagaggaatcagaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  atgacccgaggaaagcagaagatcgaagcccaaaggaaaaatgcagagaggaatcagaag 145

                                                                       
Query: 61  gcaaagggctctcagcttgaagccagagctgtcgctctcaaagtcagctgccccatctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gcaaagggctctcagcttgaagccagagctgtcgctctcaaagtcagctgccccatctgc 205

               
Query: 121 aagg 124
           ||||
Sbjct: 206 aagg 209