Jatropha Genome Database
- JcCA0312381.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0312381.20 + phase: 0
(705 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|237680302|gb|GO246486.1|GO246486 JcrME_RL0030 Expressed seque... 1193 0.0
>gi|237680302|gb|GO246486.1|GO246486 JcrME_RL0030 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 662
Score = 1193 bits (602), Expect = 0.0
Identities = 612/614 (99%), Gaps = 1/614 (0%)
Strand = Plus / Plus
Query: 1 atggcttctgttccttttcagagtctaaagcaattccaaataaacccaaagtcttgttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 atggcttctgttccttttcagagtctaaagcaattccaaataaacccaaagtcttgttct 108
Query: 61 ttctcgcctgcaatggctttttgcattccatccatgaagacctcgtttggtccctctaaa 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ttctcgcccgcaatggctttttgcattccatccatgaagacctcgtttggtccctctaaa 168
Query: 121 tcggcttttctgcaacatggtttctctttgcaattgccaaattttcctgggtttctctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tcggcttttctgcaacatggtttctctttgcaattgccaaattttcctgggtttctctca 228
Query: 181 aaaactcattcttttgctgtttatgcaagagcggccactgagaaaaccatacacgactac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aaaactcattcttttgctgtttatgcaagagcggccactgagaaaaccatacacgactac 288
Query: 241 actgtcaaggacattgatgggaacggcgttcctctcagcaaatttaaggggaaagttcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 actgtcaaggacattgatgggaacggcgttcctctcagcaaatttaaggggaaagttcta 348
Query: 301 ttgattgtcaatgttgcttcaaaatgtggtttgacggcatcaaattacacagagctctca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ttgattgtcaatgttgcttcaaaatgtggtttgacggcatcaaattacacagagctctca 408
Query: 361 cacatatatgagaagtacaagactcaaggatttgaaattctagcattcccttgcaatcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 cacatatatgagaagtacaagactcaaggatttgaaattctagcattcccttgcaatcaa 468
Query: 421 tttggaggacaagaacctgggtcaaatcctgagatcaaacaatttgcttgtaccaggtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tttggaggacaagaacctgggtcaaatcctgagatcaaacaatttgcttgtaccaggtac 528
Query: 481 aaagcagaattcccaatatttgataaggtggatgtgaatggaccaaatacagctccagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aaagcagaattcccaatatttgataaggtggatgtgaatggaccaaatacagctccagtt 588
Query: 541 taccaa-ttcctgaagtcaagtgctggaggatttttaggtgacctgatcaagtggaattt 599
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 taccaatttcctgaagtcaagtgctggaggatttttaggtgacctgatcaagtggaattt 648
Query: 600 tgagaagttcttag 613
||||||||||||||
Sbjct: 649 tgagaagttcttag 662