Jatropha Genome Database

JcCA0311881.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0311881.10 + phase: 2 /partial/short
         (133 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268516792|gb|FM892344.1|FM892344 FM892344 Jatropha curcas emb...   264   2e-71

>gi|268516792|gb|FM892344.1|FM892344 FM892344 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_002872,
           mRNA sequence
          Length = 577

 Score =  264 bits (133), Expect = 2e-71
 Identities = 133/133 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatatggtctcactgtggacttgctcaaaagtgtctataattttctttgttgctggagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aaatatggtctcactgtggacttgctcaaaagtgtctataattttctttgttgctggagt 263

                                                                       
Query: 61  ctttgttggttacacgttgaaaagtcgtgttaagagatgggcttccaagcttctcaagag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctttgttggttacacgttgaaaagtcgtgttaagagatgggcttccaagcttctcaagag 323

                        
Query: 121 attgaaggatgat 133
           |||||||||||||
Sbjct: 324 attgaaggatgat 336