Jatropha Genome Database

JcCA0311331.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0311331.10 - phase: 0 
         (939 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522713|gb|FM896156.1|FM896156 FM896156 Jatropha curcas emb...    62   1e-09

>gi|268522713|gb|FM896156.1|FM896156 FM896156 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003321,
           mRNA sequence
          Length = 597

 Score = 61.9 bits (31), Expect = 1e-09
 Identities = 106/131 (80%)
 Strand = Plus / Plus

                                                                       
Query: 100 gctatagctgctaagatatttgcgggattaagggctcaagggaattataatttgcccaaa 159
           ||||||||||||||||||| | | ||  |  | |||||||| || |||||  | || |||
Sbjct: 158 gctatagctgctaagatatattcagggcttcgagctcaaggaaactataaactccctaaa 217

                                                                       
Query: 160 cattgcgataataatgaggtcttgaaagctttgtgttctgaagctggctgggttgttgaa 219
           ||||| |||||||||||||| ||||||||| | ||| | || ||||| ||| | ||||||
Sbjct: 218 cattgtgataataatgaggtgttgaaagctctttgtgcagaggctggttggatcgttgaa 277

                      
Query: 220 gatgatggcac 230
           || ||||||||
Sbjct: 278 gaagatggcac 288