Jatropha Genome Database

JcCA0310221.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0310221.10 - phase: 0 
         (783 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237680687|gb|GO246899.1|GO246899 JcrME_RL0443 Expressed seque...    82   1e-15

>gi|237680687|gb|GO246899.1|GO246899 JcrME_RL0443 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 675

 Score = 81.8 bits (41), Expect = 1e-15
 Identities = 94/111 (84%), Gaps = 3/111 (2%)
 Strand = Plus / Minus

                                                                       
Query: 674 ttgctgaggagcagtttgcagagaaagtttctttgcagaaagggatttcgttaaagtcag 733
           ||||||||||||||||||||||||||||||||| |||||||||  ||||  ||||  |||
Sbjct: 416 ttgctgaggagcagtttgcagagaaagtttcttggcagaaaggagtttcaataaaaacag 357

                                                              
Query: 734 ctcataatttgttgtcagtagc---agagaaggacgaggacataattttct 781
           |||| || |||||||| | |||    |||||||| ||||| ||||||||||
Sbjct: 356 ctcacaacttgttgtctgcagctatggagaaggatgaggatataattttct 306