Jatropha Genome Database

JcCA0310141.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0310141.30 + phase: 0 /TE/partial
         (1170 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268516522|gb|FM889682.1|FM889682 FM889682 Jatropha curcas emb...   117   3e-26

>gi|268516522|gb|FM889682.1|FM889682 FM889682 Jatropha curcas embryo
            35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003394,
            mRNA sequence
          Length = 139

 Score =  117 bits (59), Expect = 3e-26
 Identities = 119/139 (85%)
 Strand = Plus / Minus

                                                                        
Query: 909  gaacggtctgcacctaaggtgcgttgatgaaggagaagctcaaaacatcatggattcttt 968
            ||||||| | || ||||| ||| | |||||||| |||||||||| ||| |||||||| ||
Sbjct: 139  gaacggtttacatctaagatgcatagatgaaggggaagctcaaaccattatggattcctt 80

                                                                        
Query: 969  acataatggggagtccggtccacatatgcacgggatagccttggctcaaaaaatcatgaa 1028
            ||| |  ||||||||||||||||| ||||||||||||||  | ||||||||||| |||||
Sbjct: 79   acacatcggggagtccggtccacacatgcacgggatagctctagctcaaaaaattatgaa 20

                               
Query: 1029 cctaggttattactggtca 1047
             || |||||||||||||||
Sbjct: 19   tctgggttattactggtca 1