Jatropha Genome Database

JcCA0309211.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0309211.10 - phase: 1 /partial
         (504 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524749|gb|FM895447.1|FM895447 FM895447 Jatropha curcas emb...    68   1e-11

>gi|268524749|gb|FM895447.1|FM895447 FM895447 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002369,
           mRNA sequence
          Length = 567

 Score = 67.9 bits (34), Expect = 1e-11
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 156 aagaaagctttggttttttacgcaggcaaagctcctaaaggagaaaaaacaaactggatt 215
           ||||||||||||||||||||||  || |||||||| ||||||   ||||| || ||||||
Sbjct: 9   aagaaagctttggttttttacgttgggaaagctccgaaaggaaccaaaacgaattggatt 68

                         
Query: 216 atgcacgaatatcg 229
           ||||| ||||||||
Sbjct: 69  atgcatgaatatcg 82