Jatropha Genome Database

JcCA0308991.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0308991.10 - phase: 0 /partial
         (634 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262091334|gb|GT228761.1|GT228761 JC326 Jatropha seeds from fr...   198   5e-51

>gi|262091334|gb|GT228761.1|GT228761 JC326 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL06SE.D08.scf 5', mRNA sequence
          Length = 639

 Score =  198 bits (100), Expect = 5e-51
 Identities = 283/344 (82%)
 Strand = Plus / Plus

                                                                       
Query: 169 acatggtggcttattcagtttgttgatggtttcttcagtccaatttatgaacggcttggc 228
           ||||||||| |||| ||||||||||||||||||||||||||||| ||||     ||||||
Sbjct: 277 acatggtggtttatccagtttgttgatggtttcttcagtccaatatatgctaaacttggc 336

                                                                       
Query: 229 attgacatatttggacttggatttgtcacatctctggtgtttgtattctttgtcggtgta 288
           |||||||||||||| ||||||||| | || || ||| | ||| |||||||||| ||  ||
Sbjct: 337 attgacatatttggccttggatttattacttcgctgctttttatattctttgttgggata 396

                                                                       
Query: 289 tttgtttcgtcatggatagggtccaatgttttctggcttggcgaatggttcatcaagcga 348
           || | ||| |||||| | ||  ||| |||||||||| |||| |||||||| || ||||||
Sbjct: 397 ttcgcttcatcatggttgggtgccactgttttctggattggagaatggtttattaagcga 456

                                                                       
Query: 349 atgccctttgttaggcacttatattcggcatccaagcaaattagtgctgctatttctcca 408
           ||||| ||| | | |||  |||| || || ||||||||||||||||||||||||||||||
Sbjct: 457 atgccatttatgaagcatatatactcagcttccaagcaaattagtgctgctatttctcca 516

                                                                       
Query: 409 gctcagaacactacagcattcaaagaggttgcaattatccgtcatcctcgtattggtgaa 468
           |  || || || || ||  | ||||||||||| ||||| |||||||||||   |||||||
Sbjct: 517 gaccaaaatacgactgctcttaaagaggttgccattattcgtcatcctcgccatggtgaa 576

                                                       
Query: 469 tatgcatttggtttcatcacatcaactgtcatccttcagagaga 512
           || |||||||||||| |||||||  ||||  |||||| ||||||
Sbjct: 577 tacgcatttggtttcttcacatcctctgttgtccttccgagaga 620