Jatropha Genome Database
- JcCA0308861.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0308861.20 - phase: 0
(402 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268522463|gb|FM894608.1|FM894608 FM894608 Jatropha curcas emb... 749 0.0
gi|268526408|gb|FM895262.1|FM895262 FM895262 Jatropha curcas emb... 745 0.0
gi|268522874|gb|FM896317.1|FM896317 FM896317 Jatropha curcas emb... 731 0.0
>gi|268522463|gb|FM894608.1|FM894608 FM894608 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000413,
mRNA sequence
Length = 474
Score = 749 bits (378), Expect = 0.0
Identities = 378/378 (100%)
Strand = Plus / Plus
Query: 1 atggaaaacgatgagataatggggggagataaacttatattaagaggattgaagttccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 atggaaaacgatgagataatggggggagataaacttatattaagaggattgaagttccat 156
Query: 61 ggctttcatggagtgaaaccagaagaaaggacattgggacaaaagttcttgattgatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ggctttcatggagtgaaaccagaagaaaggacattgggacaaaagttcttgattgatgta 216
Query: 121 gatgcctggatggatcttagggaagctggtaaaactgatcggctgtcagatacgattagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gatgcctggatggatcttagggaagctggtaaaactgatcggctgtcagatacgattagc 276
Query: 181 tatactgaaatttatcgcatagtcaaggaagttgtggaaggagcccctcataatcttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tatactgaaatttatcgcatagtcaaggaagttgtggaaggagcccctcataatcttctc 336
Query: 241 gagtcagtggctcacaagattgcttctacgaccctgacaaaatacccccaaatatctgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gagtcagtggctcacaagattgcttctacgaccctgacaaaatacccccaaatatctgct 396
Query: 301 gttcgcgtaaaggttgggaagcctcatgttgctgttcatggtcctctcgattatttgggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gttcgcgtaaaggttgggaagcctcatgttgctgttcatggtcctctcgattatttgggg 456
Query: 361 gttgagattctcagacgc 378
||||||||||||||||||
Sbjct: 457 gttgagattctcagacgc 474
>gi|268526408|gb|FM895262.1|FM895262 FM895262 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002059,
mRNA sequence
Length = 586
Score = 745 bits (376), Expect = 0.0
Identities = 376/376 (100%)
Strand = Plus / Minus
Query: 27 agataaacttatattaagaggattgaagttccatggctttcatggagtgaaaccagaaga 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 agataaacttatattaagaggattgaagttccatggctttcatggagtgaaaccagaaga 527
Query: 87 aaggacattgggacaaaagttcttgattgatgtagatgcctggatggatcttagggaagc 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 aaggacattgggacaaaagttcttgattgatgtagatgcctggatggatcttagggaagc 467
Query: 147 tggtaaaactgatcggctgtcagatacgattagctatactgaaatttatcgcatagtcaa 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tggtaaaactgatcggctgtcagatacgattagctatactgaaatttatcgcatagtcaa 407
Query: 207 ggaagttgtggaaggagcccctcataatcttctcgagtcagtggctcacaagattgcttc 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ggaagttgtggaaggagcccctcataatcttctcgagtcagtggctcacaagattgcttc 347
Query: 267 tacgaccctgacaaaatacccccaaatatctgctgttcgcgtaaaggttgggaagcctca 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tacgaccctgacaaaatacccccaaatatctgctgttcgcgtaaaggttgggaagcctca 287
Query: 327 tgttgctgttcatggtcctctcgattatttgggggttgagattctcagacgcagaagtat 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tgttgctgttcatggtcctctcgattatttgggggttgagattctcagacgcagaagtat 227
Query: 387 tgatgtttcgagctaa 402
||||||||||||||||
Sbjct: 226 tgatgtttcgagctaa 211
>gi|268522874|gb|FM896317.1|FM896317 FM896317 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003515,
mRNA sequence
Length = 472
Score = 731 bits (369), Expect = 0.0
Identities = 375/377 (99%)
Strand = Plus / Plus
Query: 1 atggaaaacgatgagataatggggggagataaacttatattaagaggattgaagttccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atggaaaacgatgagataatggggggagataaacttatattaagaggattgaagttccat 155
Query: 61 ggctttcatggagtgaaaccagaagaaaggacattgggacaaaagttcttgattgatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ggctttcatggagtgaaaccagaagaaaggacattgggacaaaagttcttgattgatgta 215
Query: 121 gatgcctggatggatcttagggaagctggtaaaactgatcggctgtcagatacgattagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gatgcctggatggatcttagggaagctggtaaaactgatcggctgtcagatacgattagc 275
Query: 181 tatactgaaatttatcgcatagtcaaggaagttgtggaaggagcccctcataatcttctc 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 276 tatactgaaatttatcgcatagtcaatgaagttgtggaaggagcccctcataatcttctc 335
Query: 241 gagtcagtggctcacaagattgcttctacgaccctgacaaaatacccccaaatatctgct 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 336 gagtcagtggctcacaagattgcttctacgaccctgacaaaatacccccagatatctgct 395
Query: 301 gttcgcgtaaaggttgggaagcctcatgttgctgttcatggtcctctcgattatttgggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gttcgcgtaaaggttgggaagcctcatgttgctgttcatggtcctctcgattatttgggg 455
Query: 361 gttgagattctcagacg 377
|||||||||||||||||
Sbjct: 456 gttgagattctcagacg 472