Jatropha Genome Database

JcCA0308501.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0308501.10 - phase: 0 
         (984 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268519628|gb|FM888095.1|FM888095 FM888095 Jatropha curcas emb...   626   e-179
gi|268525521|gb|FM890776.1|FM890776 FM890776 Jatropha curcas emb...   283   2e-76

>gi|268519628|gb|FM888095.1|FM888095 FM888095 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001428,
           mRNA sequence
          Length = 663

 Score =  626 bits (316), Expect = e-179
 Identities = 316/316 (100%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggttgcaacagtccaaggtctttcaggtactggttctcttcggttagctgcagctctcat 116
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ggttgcaacagtccaaggtctttcaggtactggttctcttcggttagctgcagctctcat 407

                                                                       
Query: 117 cgagcgatattttcctggggctaaagtcctgatatcatctccaacttggggtaatcacaa 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 cgagcgatattttcctggggctaaagtcctgatatcatctccaacttggggtaatcacaa 467

                                                                       
Query: 177 gaatattttcaatgacgctagagtggcatggtctgagtacagatactatgatcccaagac 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gaatattttcaatgacgctagagtggcatggtctgagtacagatactatgatcccaagac 527

                                                                       
Query: 237 agttggtttggattttgagggaatgatatcagacataaaggcagctcctgaaggatcgtt 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 agttggtttggattttgagggaatgatatcagacataaaggcagctcctgaaggatcgtt 587

                                                                       
Query: 297 tattttgctacatggctgtgctcacaacccaactggaattgatcctactcctgaacagtg 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tattttgctacatggctgtgctcacaacccaactggaattgatcctactcctgaacagtg 647

                           
Query: 357 ggaaatgattgctgat 372
           ||||||||||||||||
Sbjct: 648 ggaaatgattgctgat 663


>gi|268525521|gb|FM890776.1|FM890776 FM890776 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000715,
           mRNA sequence
          Length = 355

 Score =  283 bits (143), Expect = 2e-76
 Identities = 143/143 (100%)
 Strand = Plus / Plus

                                                                       
Query: 842 gcaaaactcagagcgaaaatatgaccaataagtggcatgtatacatgacaaaggatggaa 901
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4   gcaaaactcagagcgaaaatatgaccaataagtggcatgtatacatgacaaaggatggaa 63

                                                                       
Query: 902 ggatatccttggctggattgtctttggccaaatgtgaatatcttgcagatgcaattattg 961
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  ggatatccttggctggattgtctttggccaaatgtgaatatcttgcagatgcaattattg 123

                                  
Query: 962 attcataccataatgttagttga 984
           |||||||||||||||||||||||
Sbjct: 124 attcataccataatgttagttga 146