Jatropha Genome Database

JcCA0306451.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0306451.10 + phase: 0 /pseudo/partial
         (3546 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522642|gb|FM896683.1|FM896683 FM896683 Jatropha curcas emb...   553   e-157

>gi|268522642|gb|FM896683.1|FM896683 FM896683 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003959,
            mRNA sequence
          Length = 505

 Score =  553 bits (279), Expect = e-157
 Identities = 279/279 (100%)
 Strand = Plus / Minus

                                                                        
Query: 3247 ctaatatctgcctttgccaaactggagcagtcaggcaatacagaacaggatcgctatggg 3306
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505  ctaatatctgcctttgccaaactggagcagtcaggcaatacagaacaggatcgctatggg 446

                                                                        
Query: 3307 attcagaagttgaggcaagtatcacagaagactaattttacaaacaggtaccccgttcct 3366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445  attcagaagttgaggcaagtatcacagaagactaattttacaaacaggtaccccgttcct 386

                                                                        
Query: 3367 ttgtctcttgaagtcatccagtcaaggttggagaactactactatcgaactttggaggcg 3426
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385  ttgtctcttgaagtcatccagtcaaggttggagaactactactatcgaactttggaggcg 326

                                                                        
Query: 3427 gtgaaacatgacattgaagtcatgctaacaaattcagaatcatactttataaagaactta 3486
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325  gtgaaacatgacattgaagtcatgctaacaaattcagaatcatactttataaagaactta 266

                                                   
Query: 3487 gagctttccgggaaaatgaaacggttgtcaggctggttt 3525
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 265  gagctttccgggaaaatgaaacggttgtcaggctggttt 227