Jatropha Genome Database

JcCA0305691.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0305691.10 + phase: 0 /partial
         (654 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268519722|gb|FM888189.1|FM888189 FM888189 Jatropha curcas emb...   573   e-164

>gi|268519722|gb|FM888189.1|FM888189 FM888189 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001538,
           mRNA sequence
          Length = 552

 Score =  573 bits (289), Expect = e-164
 Identities = 295/297 (99%)
 Strand = Plus / Minus

                                                                       
Query: 358 acagttgaaaagcaacgcaaaagtaaaaaatcaactgagaaactggatgagcttgatgca 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 acagttgaaaagcaacgcaaaagtaaaaaatcaactgagaaactggatgagcttgatgca 493

                                                                       
Query: 418 attgataatggggaaacatcatttgcagactttttctctgttaattatgtggaaagttcg 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 attgataatggggaaacatcatttgcagactttttctctgttaattatgtggaaagttcg 433

                                                                       
Query: 478 aaacatagtgttgaaaagaaactgatagataaagctggtgagaacataaattctacaggt 537
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atacatagtgttgaaaagaaactgatagataaagctggtgagaacataaattctacaggt 373

                                                                       
Query: 538 ggcttggttactttgtctgcaaagaaaaagaaaactaagaaccgagtagctaatcatgca 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggcttggttactttgtctgcaaagaaaaagaaaactaagaaccgagtagctaatcatgca 313

                                                                    
Query: 598 gtccagttgcctgcagaggttgaagttggaatgggtgggccgtcaacatgggatgat 654
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 312 gtccagttgcctgcagaggttgacgttggaatgggtgggccgtcaacatgggatgat 256