Jatropha Genome Database

JcCA0304521.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0304521.10 - phase: 0 /partial/short
         (132 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237680642|gb|GO246854.1|GO246854 JcrME_RL0398 Expressed seque...   262   8e-71

>gi|237680642|gb|GO246854.1|GO246854 JcrME_RL0398 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 541

 Score =  262 bits (132), Expect = 8e-71
 Identities = 132/132 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagtgcggcttagtgatgagaaagatcttccgcagcaagacaagcagcaaatcaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 atggaagtgcggcttagtgatgagaaagatcttccgcagcaagacaagcagcaaatcaac 211

                                                                       
Query: 61  cgggatctgaagctgttcctgaagcctgtccgtgaaaaattgcttcagtttgagcaggaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 cgggatctgaagctgttcctgaagcctgtccgtgaaaaattgcttcagtttgagcaggaa 271

                       
Query: 121 ctgaaagaccgg 132
           ||||||||||||
Sbjct: 272 ctgaaagaccgg 283