Jatropha Genome Database
- JcCA0302271.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0302271.10 + phase: 0
(192 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|237681001|gb|GO247637.1|GO247637 JcrME_RL1181 Expressed seque... 381 e-106
gi|262091192|gb|GT228619.1|GT228619 JC184 Jatropha seeds from fr... 230 4e-61
gi|237680883|gb|GO247040.1|GO247040 JcrME_RL0584 Expressed seque... 198 2e-51
>gi|237681001|gb|GO247637.1|GO247637 JcrME_RL1181 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 604
Score = 381 bits (192), Expect = e-106
Identities = 192/192 (100%)
Strand = Plus / Minus
Query: 1 atggctggtggtaagattgctcatgctaccttgaaaggacctagtgttgtgaaggagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 atggctggtggtaagattgctcatgctaccttgaaaggacctagtgttgtgaaggagata 293
Query: 61 tgtattggtattgcacttggcttggctgcaggtggtctctggaagatgcatcactggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tgtattggtattgcacttggcttggctgcaggtggtctctggaagatgcatcactggaat 233
Query: 121 gaacagaggaaggtgagagcattttatgacttgctggagaaaggcgagatcagtgtcgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 gaacagaggaaggtgagagcattttatgacttgctggagaaaggcgagatcagtgtcgtc 173
Query: 181 gtagatgaataa 192
||||||||||||
Sbjct: 172 gtagatgaataa 161
>gi|262091192|gb|GT228619.1|GT228619 JC184 Jatropha seeds from
fruits at three stages of maturation Jatropha curcas
cDNA clone PL02SE.D04.scf 5', mRNA sequence
Length = 404
Score = 230 bits (116), Expect = 4e-61
Identities = 173/192 (90%)
Strand = Plus / Plus
Query: 1 atggctggtggtaagattgctcatgctaccttgaaaggacctagtgttgtgaaggagata 60
||||| || |||| |||||||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 77 atggcgggcggtaggattgctcatgccaccttgaaaggaccaagtgttgttaaggagata 136
Query: 61 tgtattggtattgcacttggcttggctgcaggtggtctctggaagatgcatcactggaat 120
|||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 137 tgtattgggattgcacttggcttggctgctggtggtctttggaagatgcatcactggaat 196
Query: 121 gaacagaggaaggtgagagcattttatgacttgctggagaaaggcgagatcagtgtcgtc 180
|| |||||||| || |||||||||||||| ||||| || ||||| ||||||||||| ||
Sbjct: 197 gagcagaggaaagttagagcattttatgatttgctagaaaaaggtgagatcagtgtggtt 256
Query: 181 gtagatgaataa 192
||||| ||||||
Sbjct: 257 gtagaagaataa 268
>gi|237680883|gb|GO247040.1|GO247040 JcrME_RL0584 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 543
Score = 198 bits (100), Expect = 2e-51
Identities = 171/192 (89%), Gaps = 2/192 (1%)
Strand = Plus / Minus
Query: 1 atggctggtggtaagattgctcatgctaccttgaaaggacctagtgttgtgaaggagata 60
||||| || |||| |||||||||||| |||||||||||||| || ||||| |||||||||
Sbjct: 320 atggcgggcggtaggattgctcatgccaccttgaaaggaccaag-gttgttaaggagata 262
Query: 61 tgtattggtattgcacttggcttggctgcaggtggtctctggaagatgcatcactggaat 120
|||||||| |||||||| ||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 261 tgtattgggattgcact-ggcttggctgctggtggtctttggaagatgcatcactggaat 203
Query: 121 gaacagaggaaggtgagagcattttatgacttgctggagaaaggcgagatcagtgtcgtc 180
|| |||||||| || |||||||||||||| ||||| || ||||| ||||||||||| ||
Sbjct: 202 gagcagaggaaagttagagcattttatgatttgctagaaaaaggtgagatcagtgtggtt 143
Query: 181 gtagatgaataa 192
||||| ||||||
Sbjct: 142 gtagaagaataa 131