Jatropha Genome Database

JcCA0300681.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0300681.10 - phase: 0 
         (1443 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525778|gb|FM891033.1|FM891033 FM891033 Jatropha curcas emb...    82   2e-15

>gi|268525778|gb|FM891033.1|FM891033 FM891033 Jatropha curcas embryo
            56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001018,
            mRNA sequence
          Length = 231

 Score = 81.8 bits (41), Expect = 2e-15
 Identities = 125/153 (81%)
 Strand = Plus / Minus

                                                                        
Query: 1289 acaaaaggatttttgagaatatgcagaaacctgcatttgtgtttgatgggagaaatgttg 1348
            |||| ||||||| ||| | ||||||||| || || || |||||||| || || || ||||
Sbjct: 218  acaagaggatttatgaaagtatgcagaagccagccttcgtgtttgacggaaggaacgttg 159

                                                                        
Query: 1349 tgaatgtggaaaaattaagagaaattggtttcattgtttactcaattgggaaaccattgg 1408
            |||||| |||  |  | || || |||||||||||||| ||||||||||| || ||| | |
Sbjct: 158  tgaatgcggatcagctgagggagattggtttcattgtatactcaattggtaagccacttg 99

                                             
Query: 1409 atccatggctcaaagacatgcctgctgtggctt 1441
            || |||||||||| |||||||||||||| ||||
Sbjct: 98   atgcatggctcaaggacatgcctgctgtagctt 66