Jatropha Genome Database

JcCA0300141.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0300141.10 - phase: 0 /partial
         (1396 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268517082|gb|FM892634.1|FM892634 FM892634 Jatropha curcas emb...   866   0.0  

>gi|268517082|gb|FM892634.1|FM892634 FM892634 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003239,
           mRNA sequence
          Length = 522

 Score =  866 bits (437), Expect = 0.0
 Identities = 446/449 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtgcattggtagccggagtcattatagatgagtcagttctaatagacaactccgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  atgggtgcattggtagccggagtcattatagatgagtcagttctaatagacaactccgcc 133

                                                                       
Query: 61  ggcttctcattaccgccggcagctctctctctcctccgtaggctccgccactccaaactc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ggcttctcattaccgccggcagctctctctctcctccgtaggctccgccactccaaactc 193

                                                                       
Query: 121 cactttggactttcttattcaccggctctaactgatgataaggtgagcctgcttgaaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cactttggactttcttattcaccggctctaactgatgataaggtgagcctgcttgaaaaa 253

                                                                       
Query: 181 atagcaatgcaatactcctttgattgctttgctttggatgctacatccactgatggtggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atagcaatgcaatactcctttgattgctttgctttggatgctacatccactgatggtggc 313

                                                                       
Query: 241 ttgaaggatataaccttggcttggggaggtataggagggactattttgtatgttgcttct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttgaaggatataaccttggcttggggaggtataggagggactattttgtatgttgcttct 373

                                                                       
Query: 301 aatagcaagaaggatggttttaatcaattaagcaatttgggctggatcactgttgtcatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aatagcaagaaggatggttttaatcaattaagcaatttgggctggatcactgttgtcatc 433

                                                                       
Query: 361 gatgctgaaggtgcagctgctggtaataattcaaccgttctttatataaataaactagaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 434 gatgctgaaggtgcagctgctggtaataattcaaccgttctttatataaataaactacaa 493

                                        
Query: 421 gaattgctttttaccatttgccacttaaa 449
           ||||||||| | |||||||||||||||||
Sbjct: 494 gaattgcttataaccatttgccacttaaa 522