Jatropha Genome Database
- JcCA0298471.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0298471.10 + phase: 0
(207 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|218686908|gb|GH295876.1|GH295876 JCL325 Jatropha curcas total... 264 3e-71
gi|218687072|gb|GH296456.1|GH296456 JCL906 Jatropha curcas total... 264 3e-71
gi|218687690|gb|GH296270.1|GH296270 JCL719 Jatropha curcas total... 264 3e-71
gi|268517950|gb|FM893325.1|FM893325 FM893325 Jatropha curcas emb... 228 2e-60
gi|268526255|gb|FM891511.1|FM891511 FM891511 Jatropha curcas emb... 86 2e-17
gi|218686967|gb|GH295935.1|GH295935 JCL384 Jatropha curcas total... 78 4e-15
gi|218687813|gb|GH296328.1|GH296328 JCL778 Jatropha curcas total... 78 4e-15
gi|268524502|gb|FM895182.1|FM895182 FM895182 Jatropha curcas emb... 78 4e-15
>gi|218686908|gb|GH295876.1|GH295876 JCL325 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 751
Score = 264 bits (133), Expect = 3e-71
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 75 agctaatgcacagcagccaaagctttttgttggcatgattctcattctcatttttgctga 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 agctaatgcacagcagccaaagctttttgttggcatgattctcattctcatttttgctga 455
Query: 135 ggcactggctctttatggactcattgttggcatcatcctttcttctcgagctgggcaatc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ggcactggctctttatggactcattgttggcatcatcctttcttctcgagctgggcaatc 515
Query: 195 tcgagcagaatag 207
|||||||||||||
Sbjct: 516 tcgagcagaatag 528
>gi|218687072|gb|GH296456.1|GH296456 JCL906 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 751
Score = 264 bits (133), Expect = 3e-71
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 75 agctaatgcacagcagccaaagctttttgttggcatgattctcattctcatttttgctga 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 agctaatgcacagcagccaaagctttttgttggcatgattctcattctcatttttgctga 455
Query: 135 ggcactggctctttatggactcattgttggcatcatcctttcttctcgagctgggcaatc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ggcactggctctttatggactcattgttggcatcatcctttcttctcgagctgggcaatc 515
Query: 195 tcgagcagaatag 207
|||||||||||||
Sbjct: 516 tcgagcagaatag 528
>gi|218687690|gb|GH296270.1|GH296270 JCL719 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 751
Score = 264 bits (133), Expect = 3e-71
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 75 agctaatgcacagcagccaaagctttttgttggcatgattctcattctcatttttgctga 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 agctaatgcacagcagccaaagctttttgttggcatgattctcattctcatttttgctga 455
Query: 135 ggcactggctctttatggactcattgttggcatcatcctttcttctcgagctgggcaatc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ggcactggctctttatggactcattgttggcatcatcctttcttctcgagctgggcaatc 515
Query: 195 tcgagcagaatag 207
|||||||||||||
Sbjct: 516 tcgagcagaatag 528
>gi|268517950|gb|FM893325.1|FM893325 FM893325 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004126,
mRNA sequence
Length = 579
Score = 228 bits (115), Expect = 2e-60
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 75 agctaatgcacagcagccaaagctttttgttggcatgattctcattctcatttttgctga 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 agctaatgcacagcagccaaagctttttgttggcatgattctcattctcatttttgctga 524
Query: 135 ggcactggctctttatggactcattgttggcatcatcctttcttctcgagctggg 189
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ggcactggctctttatggactcattgttggcatcatcctttcttctcgagctggg 579
>gi|268526255|gb|FM891511.1|FM891511 FM891511 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001817,
mRNA sequence
Length = 470
Score = 85.7 bits (43), Expect = 2e-17
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 75 agctaatgcacagcagccaaagctttttgttggcatgattctcattctcat 125
||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 420 agctaatgcacagcaaccaaagcttttagttggcatgattctcattctcat 470
>gi|218686967|gb|GH295935.1|GH295935 JCL384 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 577
Score = 77.8 bits (39), Expect = 4e-15
Identities = 108/131 (82%)
Strand = Plus / Plus
Query: 75 agctaatgcacagcagccaaagctttttgttggcatgattctcattctcatttttgctga 134
|||||||||||| ||||| || ||||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 204 agctaatgcacaacagcccaaactttttgttggaatgatcctcatcctcatctttgctga 263
Query: 135 ggcactggctctttatggactcattgttggcatcatcctttcttctcgagctgggcaatc 194
||| |||| | ||||| || |||||||| || ||| | ||||| |||||||| || ||
Sbjct: 264 agcattggcattgtatgggcttattgttgggattatcttgtcttcgcgagctggccagtc 323
Query: 195 tcgagcagaat 205
| | |||||||
Sbjct: 324 tagggcagaat 334
>gi|218687813|gb|GH296328.1|GH296328 JCL778 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 577
Score = 77.8 bits (39), Expect = 4e-15
Identities = 108/131 (82%)
Strand = Plus / Plus
Query: 75 agctaatgcacagcagccaaagctttttgttggcatgattctcattctcatttttgctga 134
|||||||||||| ||||| || ||||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 204 agctaatgcacaacagcccaaactttttgttggaatgatcctcatcctcatctttgctga 263
Query: 135 ggcactggctctttatggactcattgttggcatcatcctttcttctcgagctgggcaatc 194
||| |||| | ||||| || |||||||| || ||| | ||||| |||||||| || ||
Sbjct: 264 agcattggcattgtatgggcttattgttgggattatcttgtcttcgcgagctggccagtc 323
Query: 195 tcgagcagaat 205
| | |||||||
Sbjct: 324 tagggcagaat 334
>gi|268524502|gb|FM895182.1|FM895182 FM895182 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001963,
mRNA sequence
Length = 600
Score = 77.8 bits (39), Expect = 4e-15
Identities = 108/131 (82%)
Strand = Plus / Plus
Query: 75 agctaatgcacagcagccaaagctttttgttggcatgattctcattctcatttttgctga 134
|||||||||||| ||||| || ||||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 415 agctaatgcacaacagcccaaactttttgttggaatgatcctcatcctcatctttgctga 474
Query: 135 ggcactggctctttatggactcattgttggcatcatcctttcttctcgagctgggcaatc 194
||| |||| | ||||| || |||||||| || ||| | ||||| |||||||| || ||
Sbjct: 475 agcattggcattgtatgggcttattgttgggattatcttgtcttcgcgagctggccagtc 534
Query: 195 tcgagcagaat 205
| | |||||||
Sbjct: 535 tagggcagaat 545