Jatropha Genome Database

JcCA0298381.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0298381.10 - phase: 0 /partial
         (2913 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524305|gb|FM894985.1|FM894985 FM894985 Jatropha curcas emb...   262   2e-69

>gi|268524305|gb|FM894985.1|FM894985 FM894985 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001304,
            mRNA sequence
          Length = 291

 Score =  262 bits (132), Expect = 2e-69
 Identities = 132/132 (100%)
 Strand = Plus / Minus

                                                                        
Query: 2782 ttggctttgacggaatgccgtaccctagacttcagtgaatgtgagacacctgggaaggga 2841
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291  ttggctttgacggaatgccgtaccctagacttcagtgaatgtgagacacctgggaaggga 232

                                                                        
Query: 2842 acagaaagagggaaatcttcatctgctatgagcttctctagcccctcttcctatctgctg 2901
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231  acagaaagagggaaatcttcatctgctatgagcttctctagcccctcttcctatctgctg 172

                        
Query: 2902 aaaggctgcaga 2913
            ||||||||||||
Sbjct: 171  aaaggctgcaga 160