Jatropha Genome Database

JcCA0297621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0297621.10 - phase: 0 
         (1473 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525379|gb|FM896021.1|FM896021 FM896021 Jatropha curcas emb...   811   0.0  

>gi|268525379|gb|FM896021.1|FM896021 FM896021 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003150,
            mRNA sequence
          Length = 560

 Score =  811 bits (409), Expect = 0.0
 Identities = 412/413 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1061 aatgggcgccgcaagaagaggttttagcacataaagcaattggtgggtttttgacacaca 1120
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555  aatgggccccgcaagaagaggttttagcacataaagcaattggtgggtttttgacacaca 496

                                                                        
Query: 1121 gtggatggaactcgacattggagagtatagtagcaggtgtgcctatgatttgttggcctt 1180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495  gtggatggaactcgacattggagagtatagtagcaggtgtgcctatgatttgttggcctt 436

                                                                        
Query: 1181 attttgctgaccagcaaaccaatagtagatttgtgagtgaagtgtggaaattaggactgg 1240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435  attttgctgaccagcaaaccaatagtagatttgtgagtgaagtgtggaaattaggactgg 376

                                                                        
Query: 1241 acatgaaagatgtttgtaacagaaaggttgttgagaagatggtgaatgatctgatggtta 1300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375  acatgaaagatgtttgtaacagaaaggttgttgagaagatggtgaatgatctgatggtta 316

                                                                        
Query: 1301 ataagagggaagagtttgttagatcagctgctaggatggcagagttggcaaggaaaagta 1360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315  ataagagggaagagtttgttagatcagctgctaggatggcagagttggcaaggaaaagta 256

                                                                        
Query: 1361 ttagtgaaggtggatcctctttttgtaacctgaaccgtttgattgaagatatcaggctga 1420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255  ttagtgaaggtggatcctctttttgtaacctgaaccgtttgattgaagatatcaggctga 196

                                                                 
Query: 1421 tgagtgtgcaaacacatcataattcacaggaggataataaaacaagcttttga 1473
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195  tgagtgtgcaaacacatcataattcacaggaggataataaaacaagcttttga 143