Jatropha Genome Database

JcCA0294301.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0294301.10 - phase: 0 /partial
         (729 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525426|gb|FM896068.1|FM896068 FM896068 Jatropha curcas emb...   515   e-146
gi|268524207|gb|FM894886.1|FM894886 FM894886 Jatropha curcas emb...   192   4e-49

>gi|268525426|gb|FM896068.1|FM896068 FM896068 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003206,
           mRNA sequence
          Length = 536

 Score =  515 bits (260), Expect = e-146
 Identities = 260/260 (100%)
 Strand = Plus / Plus

                                                                       
Query: 462 taaagtttgggtgttggatggaggcttacctagatggcgtgcatcaggatatgatgttga 521
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   taaagtttgggtgttggatggaggcttacctagatggcgtgcatcaggatatgatgttga 60

                                                                       
Query: 522 atccagtgcttctggtgataccatcctgaaagctagcgctgccagtgaggcaatagagaa 581
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  atccagtgcttctggtgataccatcctgaaagctagcgctgccagtgaggcaatagagaa 120

                                                                       
Query: 582 agtatatcagggccagacagttggaccaatcacattccagacaaaatttcagccgcatct 641
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtatatcagggccagacagttggaccaatcacattccagacaaaatttcagccgcatct 180

                                                                       
Query: 642 tgtttggacccttgagcaggttaagaaaaacattgaggacaagatgcaccaacatattga 701
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtttggacccttgagcaggttaagaaaaacattgaggacaagatgcaccaacatattga 240

                               
Query: 702 tgcccgttcaaaggccaggt 721
           ||||||||||||||||||||
Sbjct: 241 tgcccgttcaaaggccaggt 260


>gi|268524207|gb|FM894886.1|FM894886 FM894886 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000779,
           mRNA sequence
          Length = 549

 Score =  192 bits (97), Expect = 4e-49
 Identities = 97/97 (100%)
 Strand = Plus / Minus

                                                                       
Query: 625 aaatttcagccgcatcttgtttggacccttgagcaggttaagaaaaacattgaggacaag 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aaatttcagccgcatcttgtttggacccttgagcaggttaagaaaaacattgaggacaag 490

                                                
Query: 685 atgcaccaacatattgatgcccgttcaaaggccaggt 721
           |||||||||||||||||||||||||||||||||||||
Sbjct: 489 atgcaccaacatattgatgcccgttcaaaggccaggt 453