Jatropha Genome Database

JcCA0292971.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0292971.10 - phase: 2 /pseudo/partial
         (728 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524681|gb|FM895379.1|FM895379 FM895379 Jatropha curcas emb...   109   4e-24
gi|268516647|gb|FM887126.1|FM887126 FM887126 Jatropha curcas emb...    60   4e-09

>gi|268524681|gb|FM895379.1|FM895379 FM895379 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002188,
           mRNA sequence
          Length = 522

 Score =  109 bits (55), Expect = 4e-24
 Identities = 55/55 (100%)
 Strand = Plus / Minus

                                                                  
Query: 674 actggaatatcaaccagaatccaagccatctgagggaaacatccacgatgagtta 728
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 actggaatatcaaccagaatccaagccatctgagggaaacatccacgatgagtta 187


>gi|268516647|gb|FM887126.1|FM887126 FM887126 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000224,
           mRNA sequence
          Length = 540

 Score = 60.0 bits (30), Expect = 4e-09
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 139 tggtaaaatgcatgcttgtggacacgatgc 168
           ||||||||||||||||||||||||||||||
Sbjct: 114 tggtaaaatgcatgcttgtggacacgatgc 143