Jatropha Genome Database

JcCA0292601.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0292601.20 + phase: 0 /partial
         (1207 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524794|gb|FM895492.1|FM895492 FM895492 Jatropha curcas emb...   416   e-116

>gi|268524794|gb|FM895492.1|FM895492 FM895492 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002423,
            mRNA sequence
          Length = 533

 Score =  416 bits (210), Expect = e-116
 Identities = 210/210 (100%)
 Strand = Plus / Plus

                                                                        
Query: 998  ttggtcgcctagttctcccaaaagcatgtgctgaagcatattttcctcctatttctcaat 1057
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ttggtcgcctagttctcccaaaagcatgtgctgaagcatattttcctcctatttctcaat 60

                                                                        
Query: 1058 ctgaaggccttcctttaaggattcaagatgtgaaggggagagaatggacatttcagttca 1117
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ctgaaggccttcctttaaggattcaagatgtgaaggggagagaatggacatttcagttca 120

                                                                        
Query: 1118 gattttggcccaataataacagcaggatgtatgtcctggagggtgtaaccccttgcatac 1177
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gattttggcccaataataacagcaggatgtatgtcctggagggtgtaaccccttgcatac 180

                                          
Query: 1178 agtctatgcaattgcaagcgggtgatacaa 1207
            ||||||||||||||||||||||||||||||
Sbjct: 181  agtctatgcaattgcaagcgggtgatacaa 210