Jatropha Genome Database
- JcCA0290151.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0290151.10 - phase: 2 /partial
(988 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268525451|gb|FM896093.1|FM896093 FM896093 Jatropha curcas emb... 969 0.0
gi|268520839|gb|FM889597.1|FM889597 FM889597 Jatropha curcas emb... 240 3e-63
>gi|268525451|gb|FM896093.1|FM896093 FM896093 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003237,
mRNA sequence
Length = 493
Score = 969 bits (489), Expect = 0.0
Identities = 489/489 (100%)
Strand = Plus / Plus
Query: 97 ccaccatccatctactaatatgttaagattaggcggagctggggccgcgaaattcgaaca 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ccaccatccatctactaatatgttaagattaggcggagctggggccgcgaaattcgaaca 64
Query: 157 cataatctctcctcctcctcccaattcgtctacatttttcatgtcggattcaaaccaaac 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cataatctctcctcctcctcccaattcgtctacatttttcatgtcggattcaaaccaaac 124
Query: 217 ttcatttccaagcaaacccttgcatggccttatgcaactccctgatcttcaaaattccac 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ttcatttccaagcaaacccttgcatggccttatgcaactccctgatcttcaaaattccac 184
Query: 277 caataataataactctaccaatctttttaatctcagcttcttttcgaataatactacccc 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 caataataataactctaccaatctttttaatctcagcttcttttcgaataatactacccc 244
Query: 337 taatcgaatgagtggtaatgacaatggcgcaaattccagtactggtacagctaccaattt 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 taatcgaatgagtggtaatgacaatggcgcaaattccagtactggtacagctaccaattt 304
Query: 397 ggtgaactcaagcttcttgaatccaaatccaaacccaaatctttataatatggatgatca 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ggtgaactcaagcttcttgaatccaaatccaaacccaaatctttataatatggatgatca 364
Query: 457 tgttagctccacagccggaatacactctctttatagtaactcaatgcagcaagaaaatat 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tgttagctccacagccggaatacactctctttatagtaactcaatgcagcaagaaaatat 424
Query: 517 caccccacacatgtctgcaactgcattgcttcaaaaagctgctcaaatgggttcaacaag 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 caccccacacatgtctgcaactgcattgcttcaaaaagctgctcaaatgggttcaacaag 484
Query: 577 tagcccaaa 585
|||||||||
Sbjct: 485 tagcccaaa 493
>gi|268520839|gb|FM889597.1|FM889597 FM889597 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003294,
mRNA sequence
Length = 321
Score = 240 bits (121), Expect = 3e-63
Identities = 124/125 (99%)
Strand = Plus / Plus
Query: 864 ataagctgactttggactttttgggtgttggagggatggtaaggaacattggtggagggc 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 ataagctgactttggactttttgggtgttggagggatggtaaggaacattggtggagggc 77
Query: 924 accatgggatcactttaagctctttggatacagaaataaagtcggcacaaggtaataaac 983
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 accatgggatcactttacgctctttggatacagaaataaagtcggcacaaggtaataaac 137
Query: 984 ccttt 988
|||||
Sbjct: 138 ccttt 142